dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001661_11|CGC2
Gene ID: MGYG000001661_01557
Location and strand information: 95262 - 96956 (-)
Family: 2.A.21.3.19
Protein type: TC
Protein description: Sodium/glucose cotransporter

Gene clsuter ID: MGYG000001661_11|CGC2
Gene ID: MGYG000001661_01558
Location and strand information: 96995 - 98134 (-)
Family: null
Protein type: null
Protein description: Aldose 1-epimerase

Gene clsuter ID: MGYG000001661_11|CGC2
Gene ID: MGYG000001661_01559
Location and strand information: 98421 - 100328 (-)
Family: GH43|GH43_4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7159
Protein molecular weight: 70868.65
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001661_11|CGC2
Gene ID: MGYG000001661_01560
Location and strand information: 100404 - 102173 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001661_11|CGC2
Gene ID: MGYG000001661_01561
Location and strand information: 102266 - 104017 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001661_11|CGC2
Gene ID: MGYG000001661_01562
Location and strand information: 104057 - 107251 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001661_11|CGC2
Gene ID: MGYG000001661_01563
Location and strand information: 107690 - 111958 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000001661_11|CGC2
Gene ID: MGYG000001661_01564
Location and strand information: 112137 - 113624 (+)
Family: GH43|GH43_4
Protein type: CAZyme
Protein description: Extracellular endo-alpha-(1->5)-L-arabinanase
Protein isoelectric point: 5.5
Protein molecular weight: 56180.18
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001661_11|CGC2
Gene ID: MGYG000001661_01565
Location and strand information: 113650 - 115641 (+)
Family: GH51
Protein type: CAZyme
Protein description: Extracellular exo-alpha-L-arabinofuranosidase
Protein isoelectric point: 6.4687
Protein molecular weight: 74415.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001661_11|CGC2
Gene ID: MGYG000001661_01566
Location and strand information: 115648 - 116628 (+)
Family: GH43|GH43_29
Protein type: CAZyme
Protein description: Xylosidase/arabinosidase
Protein isoelectric point: 6.0365
Protein molecular weight: 36965.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001661_11|CGC2
Gene ID: MGYG000001661_01567
Location and strand information: 116895 - 118952 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001661_11|CGC2
Gene ID: MGYG000001661_01568
Location and strand information: 118965 - 122204 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001661_11|CGC2
Gene ID: MGYG000001661_01569
Location and strand information: 122376 - 122954 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001661_11|CGC2
Gene ID: MGYG000001661_01570
Location and strand information: 122980 - 124134 (-)
Family: null
Protein type: null
Protein description: Galactokinase

Gene clsuter ID: MGYG000001661_11|CGC2
Gene ID: MGYG000001661_01571
Location and strand information: 124184 - 125494 (-)
Family: 2.A.1.7.2
Protein type: TC
Protein description: L-fucose-proton symporter

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001661_01559	GH43_e169\|3.2.1.99	arabinan
MGYG000001661_01564	GH43_e128\|3.2.1.99	arabinan
MGYG000001661_01565	GH51_e23\|3.2.1.55	arabinan
MGYG000001661_01566	GH43_e199\|3.2.1.-	xylan

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinan

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001661_01557	Sodium/glucose cotransporter	TC	95262	96956	-	2.A.21.3.19
MGYG000001661_01558	Aldose 1-epimerase	null	96995	98134	-	Aldose_epim
MGYG000001661_01559	hypothetical protein	CAZyme	98421	100328	-	GH43\| GH43_4
MGYG000001661_01560	hypothetical protein	null	100404	102173	-	No domain
MGYG000001661_01561	hypothetical protein	null	102266	104017	-	SusD-like_3\| SusD_RagB
MGYG000001661_01562	TonB-dependent receptor SusC	TC	104057	107251	-	1.B.14.6.1
MGYG000001661_01563	Sensor histidine kinase RcsC	TF	107690	111958	-	HTH_AraC+HTH_AraC
MGYG000001661_01564	Extracellular endo-alpha-(1->5)-L-arabinanase	CAZyme	112137	113624	+	GH43\| GH43_4
MGYG000001661_01565	Extracellular exo-alpha-L-arabinofuranosidase	CAZyme	113650	115641	+	GH51
MGYG000001661_01566	Xylosidase/arabinosidase	CAZyme	115648	116628	+	GH43\| GH43_29
MGYG000001661_01567	hypothetical protein	null	116895	118952	-	SusD-like_3\| SusD_RagB
MGYG000001661_01568	TonB-dependent receptor SusC	TC	118965	122204	-	1.B.14.6.1
MGYG000001661_01569	hypothetical protein	null	122376	122954	-	No domain
MGYG000001661_01570	Galactokinase	null	122980	124134	-	GalKase_gal_bdg\| GHMP_kinases_N\| GHMP_kinases_C
MGYG000001661_01571	L-fucose-proton symporter	TC	124184	125494	-	2.A.1.7.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature